A quantitative study of the dynamics of adaptive mutation appearance
نویسندگان
چکیده
We present two dynamical models for the appearance of adaptive mutations, which permit a quantitative comparison with experimental observations. The models quantify two alternative pictures: The hyper-mutating sub-population picture, and the population-wide mutation picture. We 3nd that both models are equally successful in reproducing the results of experiments in which a single mutation is required. They also enable us to estimate the values of key biological parameters, such as successful mutation rates. We then analyze the multiple mutations experiment of Rosche and Foster (Proc. Natl. Acad. Sci. 96 (1999) 6862) using a combined model, again obtaining quantitative agreement between theory and experiment. We conclude that additional experimental tests concentrating on the dynamics of mutation appearance, and especially the ones involving double mutations, are required in order to determine the relative contribution of the two mechanisms to adaptive mutations appearance. c © 2001 Elsevier Science B.V. All rights reserved.
منابع مشابه
Airfoil Shape Optimization with Adaptive Mutation Genetic Algorithm
An efficient method for scattering Genetic Algorithm (GA) individuals in the design space is proposed to accelerate airfoil shape optimization. The method used here is based on the variation of the mutation rate for each gene of the chromosomes by taking feedback from the current population. An adaptive method for airfoil shape parameterization is also applied and its impact on the optimum desi...
متن کاملSTRUCTURAL OPTIMIZATION USING A MUTATION-BASED GENETIC ALGORITHM
The present study is an attempt to propose a mutation-based real-coded genetic algorithm (MBRCGA) for sizing and layout optimization of planar and spatial truss structures. The Gaussian mutation operator is used to create the reproduction operators. An adaptive tournament selection mechanism in combination with adaptive Gaussian mutation operators are proposed to achieve an effective search in ...
متن کاملComparative Investigation of R213G Mutation in DNA-Binding Domain of P53 Protein via Molecular Dynamics Simulation
Introduction: P53 is a tumor suppressor protein with numerous missense mutations identified in its gene. These mutations are observed in a vast number of cancers. R213G is one of them which has a role in metastatic lung cancers. In this research, R213G was studied in comparison with the wild type via molecular dynamics simulation. Method: For the three-dimensional structure of the wild-type P53...
متن کاملEffects of T208E activating mutation on MARK2 protein structure and dynamics: Modeling and simulation
Microtubule Affinity-Regulating Kinase 2 (MARK2) protein has a substantial role in regulation of vital cellular processes like induction of polarity, regulation of cell junctions, cytoskeleton structure and cell differentiation. The abnormal function of this protein has been associated with a number of pathological conditions like Alzheimer disease, autism, several carcinomas and development of...
متن کاملComparative Investigation of R213G Mutation in DNA-Binding Domain of P53 Protein via Molecular Dynamics Simulation
Introduction: P53 is a tumor suppressor protein with numerous missense mutations identified in its gene. These mutations are observed in a vast number of cancers. R213G is one of them which has a role in metastatic lung cancers. In this research, R213G was studied in comparison with the wild type via molecular dynamics simulation. Method: For the three-dimensional structure of the wild-type P53...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
عنوان ژورنال:
دوره شماره
صفحات -
تاریخ انتشار 2001